miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9635444 NC_002356.1 Chinese wheat mosaic virus RNA2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8745 + 2095 87 25 -19.9 NP_059482 5' arm      3' arm
8750 + 2963 78 20.5 -25.7 NP_059513 5' arm      3' arm
8749 + 445 89 19.5 -20.2 NP_059514 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.