miRNA display CGI


Results 1 - 20 of 24 are showing below:
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GenBank Identifier RefSeq Acc. Name
21321727 NC_003930.1 Salmon pancreas disease virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15442 - 4593 90 23 -35.5 NP_647496 5' arm      3' arm
15447 - 8328 89 19 -30.6 NP_647497 5' arm      3' arm
15434 + 8242 86 23.5 -26.6 NP_647497 5' arm      3' arm
15432 + 5381 89 19 -25.7 NP_647496 5' arm      3' arm
15427 + 2400 89 21 -24.7 NP_647496 5' arm      3' arm
15437 + 10877 86 20.5 -24.3 NP_647497 5' arm      3' arm
15448 - 10077 87 20.5 -24.1 NP_647497 5' arm      3' arm
15443 - 4774 86 20.5 -24 NP_647496 5' arm      3' arm
15428 + 3180 90 22 -23.7 NP_647496 5' arm      3' arm
15444 - 5338 90 21 -23.5 NP_647496 5' arm      3' arm
15436 + 10292 88 24.5 -23.3 NP_647497 5' arm      3' arm
15439 - 243 88 19 -22.9 NP_647496 5' arm      3' arm
15426 + 1709 90 21 -22.7 NP_647496 5' arm      3' arm
15430 + 3917 86 20.5 -22.61 NP_647496 5' arm      3' arm
15445 - 6334 88 23 -22.3 NP_647496 5' arm      3' arm
15446 - 8046 88 20.5 -22 NP_647497 5' arm      3' arm
15433 + 7163 84 22.5 -21.3 NP_647496 5' arm      3' arm
15431 + 5197 90 19 -21.25 NP_647496 5' arm      3' arm
15438 + 11711 79 19.5 -21.1 NP_647497 5' arm      3' arm
15429 + 3475 87 19.5 -20.1 NP_647496 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.