miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9631195 NC_001987.1 Ateline herpesvirus 3

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8245 + 25770 90 28 -26.9 NP_047988 5' arm      3' arm
8246 - 40107 89 20.5 -24.3 NP_047996 5' arm      3' arm
8247 - 74065 89 22.5 -22.7 NP_597862 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.