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GenBank Identifier | RefSeq Acc. | Name |
9631279 | NC_001990.1 | Nudaurelia capensis beta virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8248 | + | 5499 | 90 | 22.5 | -29.1 | NP_048060 | 5' arm 3' arm | ||
8249 | + | 5817 | 89 | 20 | -24.1 | NP_048060 | 5' arm 3' arm | ||
8250 | - | 174 | 87 | 20 | -28.2 | NP_048059 | 5' arm 3' arm | ||
8251 | - | 1939 | 89 | 19.5 | -26.3 | NP_048059 | 5' arm 3' arm | ||
8252 | - | 2389 | 86 | 26.5 | -20.6 | NP_048059 | 5' arm 3' arm | ||
8253 | - | 3465 | 89 | 20 | -21.9 | NP_048059 | 5' arm 3' arm | ||
8254 | - | 4883 | 89 | 19.5 | -26.4 | NP_048060 | 5' arm 3' arm | ||
8255 | - | 5050 | 90 | 19 | -23.2 | NP_048060 | 5' arm 3' arm | ||
8256 | - | 6368 | 89 | 19.5 | -19.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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