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GenBank Identifier | RefSeq Acc. | Name |
38018060 | NC_005148.1 | Porcine circovirus 2 |
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ID | strand | start position | length | sRNA loop score |
core MFE.![]() |
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22990 | - | 1438 | 90 | 19 | -28.6 | NP_937957 | 5' arm 3' arm | ||
22988 | + | 420 | 89 | 24 | -23.6 | NP_937956 | 5' arm 3' arm | ||
22989 | + | 1494 | 83 | 20 | -22.2 | NP_937957 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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