miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
38018060 NC_005148.1 Porcine circovirus 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22988 + 420 89 24 -23.6 NP_937956 5' arm      3' arm
22989 + 1494 83 20 -22.2 NP_937957 5' arm      3' arm
22990 - 1438 90 19 -28.6 NP_937957 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.