miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
12831	+	29092	88	23	-27.5	NP_569772		5' arm      3' arm
12832	+	29579	88	22	-26	NP_569774		5' arm      3' arm
12833	+	29853	89	23	-32.2			5' arm      3' arm
12834	+	30371	90	20.5	-34.2	NP_569775		5' arm      3' arm
12835	+	30794	90	21	-21.2			5' arm      3' arm
12836	+	31203	90	21.5	-21.9			5' arm      3' arm
12837	+	32452	87	20.5	-23.5	NP_569780		5' arm      3' arm
12838	+	34610	88	19	-24.18	NP_569785		5' arm      3' arm
12839	+	35018	90	20.5	-21.4	NP_569787		5' arm      3' arm
12840	+	35305	88	20.5	-23.9	NP_569787		5' arm      3' arm
12841	+	35415	89	19	-20.1	NP_569787		5' arm      3' arm
12842	+	36167	90	22	-19.5			5' arm      3' arm
12843	+	37221	90	22.5	-20.8			5' arm      3' arm
12844	+	37432	88	19.5	-19.7			5' arm      3' arm
12845	+	37784	87	21.5	-30.5	NP_569792		5' arm      3' arm
12846	+	38303	90	25.5	-32.1	NP_569792		5' arm      3' arm
12847	+	38636	87	21.5	-23.2	NP_569793		5' arm      3' arm
12848	+	38794	90	19.5	-23.6	NP_569794		5' arm      3' arm
12849	+	39759	88	22	-21.1	NP_569797		5' arm      3' arm
12850	+	40882	90	19.5	-20.6	NP_569800		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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