miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
29165635 NC_002072.2 Streptococcus thermophilus bacteriophage DT1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8389 + 22802 89 21 -24.4 5' arm      3' arm
8388 + 4138 89 23 -24.3 NP_049394 5' arm      3' arm
8390 - 13741 90 23.5 -20.6 NP_049403 5' arm      3' arm
8391 - 19963 85 19 -22.3 NP_049407 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.