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| GenBank Identifier | RefSeq Acc. | Name |
| 20451021 | NC_003784.1 | Black queen cell virus |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 15154 | + | 3951 | 90 | 25.5 | -20.2 | NP_620564 | 5' arm 3' arm | ||
| 15155 | + | 7698 | 89 | 19 | -22.5 | NP_620565 | 5' arm 3' arm | ||
| 15156 | + | 8324 | 86 | 25 | -22.1 | NP_620565 | 5' arm 3' arm | ||
| 15157 | - | 8230 | 90 | 19 | -30.2 | NP_620565 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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