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GenBank Identifier | RefSeq Acc. | Name |
9632978 | NC_000874.1 | Sugarcane yellow leaf virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
825 | + | 1012 | 87 | 19.5 | -20.9 | NP_050006 | 5' arm 3' arm | ||
827 | + | 5432 | 89 | 20.5 | -22.5 | NP_050010 | 5' arm 3' arm | ||
826 | + | 5327 | 90 | 19 | -30.5 | NP_050010 | 5' arm 3' arm | ||
830 | - | 5146 | 86 | 23.5 | -25.3 | NP_050010 | 5' arm 3' arm | ||
829 | - | 4362 | 89 | 23 | -21.5 | NP_050010 | 5' arm 3' arm | ||
828 | - | 3778 | 90 | 21 | -21 | NP_050010 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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