Results 1 - 20 of 48 are showing below:
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GenBank Identifier | RefSeq Acc. | Name |
9633396 | NC_000902.1 | Bacteriophage VT2-Sa provirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
970 | + | 50156 | 82 | 19 | -20.8 | NP_050570 | 5' arm 3' arm | ||
955 | + | 25085 | 86 | 19 | -37.2 | NP_050542 | 5' arm 3' arm | ||
979 | - | 5819 | 88 | 19 | -19.8 | NP_050511 | 5' arm 3' arm | ||
988 | - | 37827 | 90 | 19 | -21.5 | NP_050557 | 5' arm 3' arm | ||
992 | - | 50508 | 89 | 19 | -20.52 | NP_050570 | 5' arm 3' arm | ||
965 | + | 44538 | 87 | 19 | -34.4 | 5' arm 3' arm | |||
984 | - | 23980 | 89 | 19.5 | -21.81 | NP_050541 | 5' arm 3' arm | ||
964 | + | 41933 | 90 | 19.5 | -21.5 | NP_050561 | 5' arm 3' arm | ||
971 | + | 50326 | 88 | 19.5 | -21.3 | NP_050570 | 5' arm 3' arm | ||
989 | - | 38198 | 88 | 19.5 | -21 | NP_050557 | 5' arm 3' arm | ||
978 | - | 4157 | 90 | 20 | -21.1 | NP_050508 | 5' arm 3' arm | ||
982 | - | 14370 | 90 | 20 | -20.5 | NP_050526 | 5' arm 3' arm | ||
969 | + | 49049 | 82 | 20 | -22 | NP_050570 | 5' arm 3' arm | ||
954 | + | 24772 | 90 | 20 | -20.8 | NP_050542 | 5' arm 3' arm | ||
980 | - | 7461 | 89 | 20 | -22.9 | NP_050514 | 5' arm 3' arm | ||
985 | - | 24309 | 86 | 20 | -26.3 | NP_050541 | 5' arm 3' arm | ||
966 | + | 45859 | 89 | 20 | -23.4 | NP_050566 | 5' arm 3' arm | ||
962 | + | 40036 | 89 | 20.5 | -21.2 | NP_050560 | 5' arm 3' arm | ||
986 | - | 27421 | 90 | 20.5 | -24.1 | NP_050546 | 5' arm 3' arm | ||
973 | + | 55240 | 86 | 20.5 | -31.6 | NP_050570 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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