miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
9808	-	35426	90	24.5	-21.04	NP_068262		5' arm      3' arm
9805	-	31250	80	23	-21	NP_068256		5' arm      3' arm
9800	-	11134	89	22.5	-24.2	NP_068237		5' arm      3' arm
9799	-	11043	90	22.5	-25.3	NP_068237		5' arm      3' arm
9789	+	13476	89	22	-19.7	NP_068240		5' arm      3' arm
9791	+	17912	72	22	-22.7	NP_068244		5' arm      3' arm
9793	+	29112	88	22	-22.41	NP_068254		5' arm      3' arm
9790	+	13714	89	21.5	-20.9	NP_068240		5' arm      3' arm
9812	-	70328	90	21.5	-23.7	NP_068308		5' arm      3' arm
9813	-	81323	90	21.5	-20.4	NP_068317		5' arm      3' arm
9797	+	67568	89	21.5	-28.8	NP_068303		5' arm      3' arm
9801	-	23416	87	21	-28.1	NP_068249		5' arm      3' arm
9802	-	28841	78	21	-23.2	NP_068254		5' arm      3' arm
9798	+	88272	87	20.5	-20.5	NP_068325		5' arm      3' arm
9809	-	36454	85	20.5	-29.2	NP_068264		5' arm      3' arm
9806	-	31725	89	20.5	-21.2	NP_068256		5' arm      3' arm
9811	-	51818	86	20	-19.5	NP_068286		5' arm      3' arm
9796	+	38587	89	20	-22.4	NP_068268		5' arm      3' arm
9803	-	30807	90	20	-22.7	NP_068256		5' arm      3' arm
9792	+	18011	90	20	-21.7	NP_068244		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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