Results 21 - 30 of 30 are showing below:
Show page:
<< Previous Page | Next Page >>
Acc. No. | Name | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | - | 102150 | 0.75 | 0.762907 |
Target: 5'- aGACUCCGGGGUUGcggAGGUUGg -3' miRNA: 3'- -UUGAGGCCCCGACuagUCCAAU- -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | - | 116400 | 0.72 | 0.906868 |
Target: 5'- -uCUCCGGGGUcagcgaggcccucuuUGAUCAGGa-- -3' miRNA: 3'- uuGAGGCCCCG---------------ACUAGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | - | 122599 | 0.66 | 0.995222 |
Target: 5'- ---aCCGuGGGCaUGAUCAGGg-- -3' miRNA: 3'- uugaGGC-CCCG-ACUAGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | + | 125704 | 0.66 | 0.997137 |
Target: 5'- cACUCCGGGa--GAUCAGGa-- -3' miRNA: 3'- uUGAGGCCCcgaCUAGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | + | 133999 | 0.7 | 0.940153 |
Target: 5'- uGC-CCGGGGCggcgGGUCGGGa-- -3' miRNA: 3'- uUGaGGCCCCGa---CUAGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | - | 152422 | 0.67 | 0.993445 |
Target: 5'- uGCUCUGGGuGCUGGgaaaaaugauUCAGGa-- -3' miRNA: 3'- uUGAGGCCC-CGACU----------AGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | + | 169591 | 0.66 | 0.996587 |
Target: 5'- gGGCUCCGGGGgCUG--CGGGc-- -3' miRNA: 3'- -UUGAGGCCCC-GACuaGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | + | 170128 | 0.66 | 0.996587 |
Target: 5'- gGGCUCCGGGGgCUG--CGGGc-- -3' miRNA: 3'- -UUGAGGCCCC-GACuaGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | + | 170651 | 0.74 | 0.83169 |
Target: 5'- gGGCUCCGGGGCUG--CGGGc-- -3' miRNA: 3'- -UUGAGGCCCCGACuaGUCCaau -5' |
|||||||
MIMAT0000995 | ebv-miR-BHRF1-1 | -48.6 | NC_007605.1 | + | 171188 | 0.66 | 0.996587 |
Target: 5'- gGGCUCCGGGGgCUG--CGGGc-- -3' miRNA: 3'- -UUGAGGCCCC-GACuaGUCCaau -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home