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| GenBank Identifier | RefSeq Acc. | Name |
| 12084824 | NC_002641.1 | Meleagrid herpesvirus 1 |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9969 | - | 153433 | 83 | 20 | -22 | NP_073381 | 5' arm 3' arm | ||
| 9960 | - | 134520 | 90 | 20 | -24.8 | 5' arm 3' arm | |||
| 9963 | - | 146972 | 90 | 20 | -22.7 | 5' arm 3' arm | |||
| 9911 | + | 149658 | 89 | 20 | -23.3 | NP_073381 | 5' arm 3' arm | ||
| 9952 | - | 125089 | 90 | 20.5 | -27.8 | NP_073364 | 5' arm 3' arm | ||
| 9867 | + | 2210 | 86 | 20.5 | -19.7 | 5' arm 3' arm | |||
| 9950 | - | 121477 | 86 | 20.5 | -19.7 | 5' arm 3' arm | |||
| 9898 | + | 128546 | 85 | 20.5 | -23.1 | NP_073381 | 5' arm 3' arm | ||
| 9951 | - | 122450 | 86 | 20.5 | -26.2 | 5' arm 3' arm | |||
| 9959 | - | 134283 | 89 | 20.5 | -23.8 | 5' arm 3' arm | |||
| 9957 | - | 131350 | 85 | 20.5 | -25.2 | NP_073381 | 5' arm 3' arm | ||
| 9944 | - | 108967 | 85 | 20.5 | -29.5 | 5' arm 3' arm | |||
| 9938 | - | 72140 | 88 | 20.5 | -19.8 | NP_073330 | 5' arm 3' arm | ||
| 9974 | - | 157449 | 89 | 20.5 | -22 | NP_073383 | 5' arm 3' arm | ||
| 9882 | + | 117907 | 86 | 20.5 | -26.8 | 5' arm 3' arm | |||
| 9918 | + | 157507 | 90 | 20.5 | -27.8 | NP_073365 | 5' arm 3' arm | ||
| 9910 | + | 148313 | 89 | 20.5 | -23.8 | 5' arm 3' arm | |||
| 9912 | + | 151246 | 85 | 20.5 | -25.2 | NP_073381 | 5' arm 3' arm | ||
| 9970 | - | 154050 | 85 | 20.5 | -23.1 | NP_073366 | 5' arm 3' arm | ||
| 9894 | + | 125147 | 89 | 20.5 | -22 | NP_073364 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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