miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
11434	3'	-59.6	NC_003085.1	+	24131	0.74	0.127619
	Target:  5'- gCGCGCCauccaccuugucGGUGGCcaccacGGCGUCGUCCACc -3' miRNA:   3'- -GCGUGG------------UCGCCGca----CCGCAGUAGGUG- -5'
11434	3'	-59.6	NC_003085.1	+	45265	0.75	0.120791
	Target:  5'- gCGCGUCAGCGGCGUccuGCGUCugcUCCACc -3' miRNA:   3'- -GCGUGGUCGCCGCAc--CGCAGu--AGGUG- -5'
11434	3'	-59.6	NC_003085.1	+	26697	0.79	0.059861
	Target:  5'- cCGuCGCCAccGCGGCG-GGCGUCGUCgGCg -3' miRNA:   3'- -GC-GUGGU--CGCCGCaCCGCAGUAGgUG- -5'
11434	3'	-59.6	NC_003085.1	+	48691	0.79	0.054949
	Target:  5'- gCGCACCGuugcGCGGCGUGGCGgacUCGcCCACc -3' miRNA:   3'- -GCGUGGU----CGCCGCACCGC---AGUaGGUG- -5'
11434	3'	-59.6	NC_003085.1	+	34340	0.82	0.034693
	Target:  5'- uCGCACCAcGCGGCGcGGCGcucCAUCCGCu -3' miRNA:   3'- -GCGUGGU-CGCCGCaCCGCa--GUAGGUG- -5'
11434	3'	-59.6	NC_003085.1	+	19804	0.87	0.013687
	Target:  5'- aCGCACCGGCGGCGUGGacauCGUCGaCCACu -3' miRNA:   3'- -GCGUGGUCGCCGCACC----GCAGUaGGUG- -5'
11434	3'	-59.6	NC_003085.1	+	36765	1.08	0.00037
	Target:  5'- gCGCACCAGCGGCGUGGCGUCAUCCACc -3' miRNA:   3'- -GCGUGGUCGCCGCACCGCAGUAGGUG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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