miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
11971	3'	-55.8	NC_003278.1	+	32147	0.72	0.24873
	Target:  5'- aCUGCGGCGagcugggcggucUGGCCcagucGCGGAAGCGCu -3' miRNA:   3'- aGAUGCCGC------------GUCGGu----UGUCUUCGCGc -5'
11971	3'	-55.8	NC_003278.1	+	21413	0.73	0.2114
	Target:  5'- --cGCGGCGCcGCCGACgcgcuGGAcGGCGCGc -3' miRNA:   3'- agaUGCCGCGuCGGUUG-----UCU-UCGCGC- -5'
11971	3'	-55.8	NC_003278.1	+	6687	0.74	0.169212
	Target:  5'- cUCUuCGGCgaugacGCAGCCGGCGGuacGCGCGa -3' miRNA:   3'- -AGAuGCCG------CGUCGGUUGUCuu-CGCGC- -5'
11971	3'	-55.8	NC_003278.1	+	31681	0.75	0.155435
	Target:  5'- cCUGCGGCGCcGCCGcccaggccgcaGCAGAAGUGg- -3' miRNA:   3'- aGAUGCCGCGuCGGU-----------UGUCUUCGCgc -5'
11971	3'	-55.8	NC_003278.1	+	33263	0.75	0.155435
	Target:  5'- cCU-CGGcCGCAGCCGGCGGAAcCGCa -3' miRNA:   3'- aGAuGCC-GCGUCGGUUGUCUUcGCGc -5'
11971	3'	-55.8	NC_003278.1	+	35529	0.75	0.13825
	Target:  5'- uUCUGCGGacccCAGCCAGCAGGcuuggcgGGCGCu -3' miRNA:   3'- -AGAUGCCgc--GUCGGUUGUCU-------UCGCGc -5'
11971	3'	-55.8	NC_003278.1	+	10546	1.09	0.000456
	Target:  5'- aUCUACGGCGCAGCCAACAGAAGCGCGu -3' miRNA:   3'- -AGAUGCCGCGUCGGUUGUCUUCGCGC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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