miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
12117	3'	-59.4	NC_003309.1	+	19875	0.66	0.431607
	Target:  5'- cGCGACCGUGUcgaccuuuuucgcgaCCGCcauGUCGCCc--- -3' miRNA:   3'- aCGCUGGCACG---------------GGUGu--CAGCGGucuu -5'
12117	3'	-59.4	NC_003309.1	+	48026	0.67	0.418424
	Target:  5'- aGUGGCCG-GUCga-GGUCGCCGGAu -3' miRNA:   3'- aCGCUGGCaCGGgugUCAGCGGUCUu -5'
12117	3'	-59.4	NC_003309.1	+	22145	0.67	0.373411
	Target:  5'- cGCGACaCGcGCCCcgcCAGUCGCCc--- -3' miRNA:   3'- aCGCUG-GCaCGGGu--GUCAGCGGucuu -5'
12117	3'	-59.4	NC_003309.1	+	11263	0.67	0.373411
	Target:  5'- uUGCG-CC--GCCCGCA-UCGCCAGAc -3' miRNA:   3'- -ACGCuGGcaCGGGUGUcAGCGGUCUu -5'
12117	3'	-59.4	NC_003309.1	+	49997	0.68	0.323898
	Target:  5'- aGCGcACUGUGCCCGCAcuucCGCCAu-- -3' miRNA:   3'- aCGC-UGGCACGGGUGUca--GCGGUcuu -5'
12117	3'	-59.4	NC_003309.1	+	49940	0.7	0.272525
	Target:  5'- gGCGGCCGaGCCgGuCAGUUGCCcGAGc -3' miRNA:   3'- aCGCUGGCaCGGgU-GUCAGCGGuCUU- -5'
12117	3'	-59.4	NC_003309.1	+	7117	0.74	0.137053
	Target:  5'- cGCGACCGuUGCaCCACGaaccgCGCCGGAGa -3' miRNA:   3'- aCGCUGGC-ACG-GGUGUca---GCGGUCUU- -5'
12117	3'	-59.4	NC_003309.1	+	11042	1.06	0.000565
	Target:  5'- gUGCGACCGUGCCCACAGUCGCCAGAAu -3' miRNA:   3'- -ACGCUGGCACGGGUGUCAGCGGUCUU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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