miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
13308	3'	-49.3	NC_003409.1	+	35159	0.69	0.960884
	Target:  5'- cAGCGAGCUCAAGGCc--UGUGCc-- -3' miRNA:   3'- cUCGCUCGAGUUUCGuuuGUACGacg -5'
13308	3'	-49.3	NC_003409.1	+	95421	0.69	0.960884
	Target:  5'- aGAGCGcGCUCAcuguccAGGCGGcACAUGgUGUc -3' miRNA:   3'- -CUCGCuCGAGU------UUCGUU-UGUACgACG- -5'
13308	3'	-49.3	NC_003409.1	+	115586	0.7	0.948343
	Target:  5'- --aCGAGCUCAGAGCuccuuGACGaGCcGCg -3' miRNA:   3'- cucGCUCGAGUUUCGu----UUGUaCGaCG- -5'
13308	3'	-49.3	NC_003409.1	+	108247	0.71	0.922048
	Target:  5'- cGAGCGA-CUCGAAGUccGCccGCUGUa -3' miRNA:   3'- -CUCGCUcGAGUUUCGuuUGuaCGACG- -5'
13308	3'	-49.3	NC_003409.1	+	44775	0.72	0.888901
	Target:  5'- aGGCGAGCUCAucgcccuuGAGCAGGCGcuucucaaGCUcGCg -3' miRNA:   3'- cUCGCUCGAGU--------UUCGUUUGUa-------CGA-CG- -5'
13308	3'	-49.3	NC_003409.1	+	99481	0.73	0.856843
	Target:  5'- uGAGCGcaguauuGGCguggCGcAGCAcACGUGCUGCg -3' miRNA:   3'- -CUCGC-------UCGa---GUuUCGUuUGUACGACG- -5'
13308	3'	-49.3	NC_003409.1	+	54778	1.13	0.005066
	Target:  5'- cGAGCGAGCUCAAAGCAAACAUGCUGCu -3' miRNA:   3'- -CUCGCUCGAGUUUCGUUUGUACGACG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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