miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
13381	3'	-52.3	NC_003409.1	+	104919	0.66	0.981165
	Target:  5'- ---cUCugGCGGGCGGUCUuggugAGGCg-- -3' miRNA:   3'- cucaAGugCGCCUGCUAGG-----UCUGauc -5'
13381	3'	-52.3	NC_003409.1	+	10703	0.66	0.981165
	Target:  5'- cGGGUUUGCGC-GAgGAUCUGGACa-- -3' miRNA:   3'- -CUCAAGUGCGcCUgCUAGGUCUGauc -5'
13381	3'	-52.3	NC_003409.1	+	69931	0.66	0.976503
	Target:  5'- aGGGUUCACGCaugcGCGAgUCCcGACUAa -3' miRNA:   3'- -CUCAAGUGCGcc--UGCU-AGGuCUGAUc -5'
13381	3'	-52.3	NC_003409.1	+	130411	0.66	0.971046
	Target:  5'- cGGgcUACGUGGugGcgCCGGACa-- -3' miRNA:   3'- cUCaaGUGCGCCugCuaGGUCUGauc -5'
13381	3'	-52.3	NC_003409.1	+	9825	0.66	0.971046
	Target:  5'- cGAGcacUCACGUcccuaacgGGACGGUCCAGuACUu- -3' miRNA:   3'- -CUCa--AGUGCG--------CCUGCUAGGUC-UGAuc -5'
13381	3'	-52.3	NC_003409.1	+	56151	0.68	0.944896
	Target:  5'- cAGUgCACGCaccAgGAUCCAGACUGGu -3' miRNA:   3'- cUCAaGUGCGcc-UgCUAGGUCUGAUC- -5'
13381	3'	-52.3	NC_003409.1	+	18053	0.69	0.918876
	Target:  5'- gGGGUUCACGCGGGCauacgcagCCAaGCUAu -3' miRNA:   3'- -CUCAAGUGCGCCUGcua-----GGUcUGAUc -5'
13381	3'	-52.3	NC_003409.1	+	37918	1.01	0.019652
	Target:  5'- cGAGUUC-CGCGGACGAUCCAGACUAGg -3' miRNA:   3'- -CUCAAGuGCGCCUGCUAGGUCUGAUC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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