miRNA display CGI

Results 21 - 25 of 25 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
13460	3'	-42.2	NC_003409.1	+	63518	0.72	0.998989
	Target:  5'- gGUC-CAUUCacguaUGUGAUCGCGGa -3' miRNA:   3'- aCAGuGUAAG-----ACACUGGCGCU- -5'
13460	3'	-42.2	NC_003409.1	+	116367	0.72	0.998744
	Target:  5'- gGUCGCAg--UG-GACCGCGAg -3' miRNA:   3'- aCAGUGUaagACaCUGGCGCU- -5'
13460	3'	-42.2	NC_003409.1	+	113237	0.75	0.987818
	Target:  5'- cGUCGCGg--UGUGGCUGCGAc -3' miRNA:   3'- aCAGUGUaagACACUGGCGCU- -5'
13460	3'	-42.2	NC_003409.1	+	93341	0.76	0.979321
	Target:  5'- -uUCGC--UCUGUGACCGUGAu -3' miRNA:   3'- acAGUGuaAGACACUGGCGCU- -5'
13460	3'	-42.2	NC_003409.1	+	121424	1.07	0.060773
	Target:  5'- gUGUCACAUUCUGUGACCGCGAc -3' miRNA:   3'- -ACAGUGUAAGACACUGGCGCU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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