miRNA display CGI

Results 61 - 67 of 67 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
13972	5'	-55.4	NC_003521.1	+	16396	0.72	0.746045
	Target:  5'- -aCCGCUCGcCCACC-ACGcAGcGCCUGg -3' miRNA:   3'- uaGGCGAGU-GGUGGaUGC-UCaUGGAC- -5'
13972	5'	-55.4	NC_003521.1	+	15121	0.66	0.955504
	Target:  5'- gAUCCGCaCGagggCGCCUGgGAGcGCCUGg -3' miRNA:   3'- -UAGGCGaGUg---GUGGAUgCUCaUGGAC- -5'
13972	5'	-55.4	NC_003521.1	+	14324	0.66	0.959181
	Target:  5'- uAUUCGCgCAUCuacGCCUACGAcacccgcgaccaGUACCUGg -3' miRNA:   3'- -UAGGCGaGUGG---UGGAUGCU------------CAUGGAC- -5'
13972	5'	-55.4	NC_003521.1	+	13197	0.66	0.959181
	Target:  5'- -gCCGCUCggGCCGCCgugUugGAGgGCCg- -3' miRNA:   3'- uaGGCGAG--UGGUGG---AugCUCaUGGac -5'
13972	5'	-55.4	NC_003521.1	+	11776	0.66	0.965897
	Target:  5'- -aCgGCUCAUCugCUGCGAGgagucCCUc -3' miRNA:   3'- uaGgCGAGUGGugGAUGCUCau---GGAc -5'
13972	5'	-55.4	NC_003521.1	+	9216	0.66	0.968945
	Target:  5'- -aCCaGC-CACCACCUugGAG-AUUUGg -3' miRNA:   3'- uaGG-CGaGUGGUGGAugCUCaUGGAC- -5'
13972	5'	-55.4	NC_003521.1	+	1155	0.66	0.962644
	Target:  5'- cGUCCccgggaGCcacggCGCCGCCUACGGGacuggacgGCCUGu -3' miRNA:   3'- -UAGG------CGa----GUGGUGGAUGCUCa-------UGGAC- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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