miRNA display CGI

Results 41 - 50 of 50 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
18753	3'	-59.6	NC_004683.1	+	52489	0.66	0.525482
	Target:  5'- uCUCGCGcGCUG-GCUCGGCaagcacgugcaGGcGAUCGc -3' miRNA:   3'- -GAGCGC-CGGCuUGAGCCG-----------CC-CUAGCu -5'
18753	3'	-59.6	NC_004683.1	+	53611	0.72	0.245013
	Target:  5'- uUCGCcGCCGAGCUgCGGCGcGAUCa- -3' miRNA:   3'- gAGCGcCGGCUUGA-GCCGCcCUAGcu -5'
18753	3'	-59.6	NC_004683.1	+	53690	0.69	0.350922
	Target:  5'- aUCGC-GCCGcAGCUCGGCGGcGAagacgCGGc -3' miRNA:   3'- gAGCGcCGGC-UUGAGCCGCC-CUa----GCU- -5'
18753	3'	-59.6	NC_004683.1	+	54011	0.69	0.33431
	Target:  5'- cCUCGuCGGCC-AugUCcuuugccaucucgGGCGGGAUCGc -3' miRNA:   3'- -GAGC-GCCGGcUugAG-------------CCGCCCUAGCu -5'
18753	3'	-59.6	NC_004683.1	+	54050	0.67	0.456553
	Target:  5'- -cCGCGG-UGAGCUUGGCGacGUCGAa -3' miRNA:   3'- gaGCGCCgGCUUGAGCCGCccUAGCU- -5'
18753	3'	-59.6	NC_004683.1	+	54236	0.66	0.511349
	Target:  5'- -gCGCGGCCGuugaccuuuggccGCUCGGCGucGAuaUCGAu -3' miRNA:   3'- gaGCGCCGGCu------------UGAGCCGCc-CU--AGCU- -5'
18753	3'	-59.6	NC_004683.1	+	54461	0.68	0.392782
	Target:  5'- gUUGCGGCCGGGCaUGcGuuGGGUCGGg -3' miRNA:   3'- gAGCGCCGGCUUGaGC-CgcCCUAGCU- -5'
18753	3'	-59.6	NC_004683.1	+	56282	0.66	0.545919
	Target:  5'- aCUgGCGGCCGAgguagaagcugACgaugCgGGUGGGcgCGGu -3' miRNA:   3'- -GAgCGCCGGCU-----------UGa---G-CCGCCCuaGCU- -5'
18753	3'	-59.6	NC_004683.1	+	56571	0.66	0.545919
	Target:  5'- -gUGCGGCCGGGCaugCGuCGGGAccugCGGu -3' miRNA:   3'- gaGCGCCGGCUUGa--GCcGCCCUa---GCU- -5'
18753	3'	-59.6	NC_004683.1	+	56828	0.7	0.297819
	Target:  5'- gUCGUGGCCGAgaucccaugGCUCGuCGGGcUUGAu -3' miRNA:   3'- gAGCGCCGGCU---------UGAGCcGCCCuAGCU- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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