Results 41 - 44 of 44 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
18756 | 3' | -60.9 | NC_004683.1 | + | 44047 | 0.73 | 0.133642 |
Target: 5'- aUCCgGgaggCGCGCGGGUGCUGCCAg-- -3' miRNA: 3'- aAGGgCa---GCGCGUUCGCGACGGUggc -5' |
|||||||
18756 | 3' | -60.9 | NC_004683.1 | + | 20407 | 0.74 | 0.119883 |
Target: 5'- gUgCUGuUCGCGCGGgacaugaacGCGCUGCCGCCGu -3' miRNA: 3'- aAgGGC-AGCGCGUU---------CGCGACGGUGGC- -5' |
|||||||
18756 | 3' | -60.9 | NC_004683.1 | + | 50952 | 0.85 | 0.018025 |
Target: 5'- cUUCCCGUCGCGCAcAGCGCUccggccgcacccGCCGCCa -3' miRNA: 3'- -AAGGGCAGCGCGU-UCGCGA------------CGGUGGc -5' |
|||||||
18756 | 3' | -60.9 | NC_004683.1 | + | 2611 | 1.06 | 0.000403 |
Target: 5'- cUUCCCGUCGCGCAAGCGCUGCCACCGg -3' miRNA: 3'- -AAGGGCAGCGCGUUCGCGACGGUGGC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home