miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
27029	3'	-57.9	NC_005832.1	+	67035	0.7	0.523703
	Target:  5'- -cGGCGGccGUGGc-GAGGGCCGCgGGCg -3' miRNA:   3'- guUUGCC--CACCucCUCUCGGUGgCCG- -5'
27029	3'	-57.9	NC_005832.1	+	26615	0.7	0.513833
	Target:  5'- gAGACGcggccuuuaaGGUGGc-GAGGGCCGCCGGg -3' miRNA:   3'- gUUUGC----------CCACCucCUCUCGGUGGCCg -5'
27029	3'	-57.9	NC_005832.1	+	75099	0.72	0.411267
	Target:  5'- --cAUGGGaGGAGGAGuggcgGGCCACUGGg -3' miRNA:   3'- guuUGCCCaCCUCCUC-----UCGGUGGCCg -5'
27029	3'	-57.9	NC_005832.1	+	91966	0.73	0.377225
	Target:  5'- -uGGCGaGGUGGgccAGGAGcAGCCuaaaACCGGCu -3' miRNA:   3'- guUUGC-CCACC---UCCUC-UCGG----UGGCCG- -5'
27029	3'	-57.9	NC_005832.1	+	10972	0.73	0.358529
	Target:  5'- --cGCGGGUcugaccuuugccggGGAGGugcugGGAGgCACCGGCa -3' miRNA:   3'- guuUGCCCA--------------CCUCC-----UCUCgGUGGCCG- -5'
27029	3'	-57.9	NC_005832.1	+	99668	0.74	0.329838
	Target:  5'- aAGACGGGc-GAGGAGAuGCCAgCGGUu -3' miRNA:   3'- gUUUGCCCacCUCCUCU-CGGUgGCCG- -5'
27029	3'	-57.9	NC_005832.1	+	10602	1.11	0.000886
	Target:  5'- gCAAACGGGUGGAGGAGAGCCACCGGCa -3' miRNA:   3'- -GUUUGCCCACCUCCUCUCGGUGGCCG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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