miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
27977	5'	-52.3	NC_005886.2	+	39437	0.66	0.76899
	Target:  5'- cUugGUGcAACgGAAGCCGcgaguugcGCGACAAGAu -3' miRNA:   3'- -AugCGC-UUGgCUUCGGC--------CGUUGUUUU- -5'
27977	5'	-52.3	NC_005886.2	+	39853	0.74	0.340038
	Target:  5'- gGCGCGggUCGAAGUCGcGCAaaGCGGGu -3' miRNA:   3'- aUGCGCuuGGCUUCGGC-CGU--UGUUUu -5'
27977	5'	-52.3	NC_005886.2	+	41753	0.67	0.736354
	Target:  5'- aUGCGCGGAaccauUCGAGGCCuGcCGGCAGAc -3' miRNA:   3'- -AUGCGCUU-----GGCUUCGGcC-GUUGUUUu -5'
27977	5'	-52.3	NC_005886.2	+	44508	0.69	0.622007
	Target:  5'- gACGU--GCUGAAGCCGuGCAACGu-- -3' miRNA:   3'- aUGCGcuUGGCUUCGGC-CGUUGUuuu -5'
27977	5'	-52.3	NC_005886.2	+	45451	0.69	0.610429
	Target:  5'- aACGCGGAUUGAagcgaagcacaaAGCCGcaGCGGCAAAGa -3' miRNA:   3'- aUGCGCUUGGCU------------UCGGC--CGUUGUUUU- -5'
27977	5'	-52.3	NC_005886.2	+	46323	0.66	0.76899
	Target:  5'- aUGCGgGAACCgcGAAGucuuCCGGCAACu--- -3' miRNA:   3'- -AUGCgCUUGG--CUUC----GGCCGUUGuuuu -5'
27977	5'	-52.3	NC_005886.2	+	46955	0.66	0.800219
	Target:  5'- gAUGCGAucauucgcauuGCCGAucuGGCCGGC-GCGc-- -3' miRNA:   3'- aUGCGCU-----------UGGCU---UCGGCCGuUGUuuu -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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