Results 61 - 80 of 92 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 105300 | 0.75 | 0.999095 |
Target: 5'- aUUUGUUUGUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- -AAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 162747 | 0.76 | 0.998876 |
Target: 5'- cUCAUUCAUAUAUAGcUUAGGUaUUAa -3' miRNA: 3'- aAGUAAGUAUAUAUCaAGUCCAcAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 13219 | 0.76 | 0.998613 |
Target: 5'- cUUAcUCAUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- aAGUaAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 32390 | 0.76 | 0.998613 |
Target: 5'- cUUGUUCGUAUAUAGUUUAaGUGUUAa -3' miRNA: 3'- aAGUAAGUAUAUAUCAAGUcCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 125569 | 0.77 | 0.996386 |
Target: 5'- cUUGUUUAUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- aAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 94177 | 0.77 | 0.996386 |
Target: 5'- cUUAUUUGUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- aAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 71682 | 0.77 | 0.996386 |
Target: 5'- cUUAUUUGUAUAUAGcUUAGGUGUUAg -3' miRNA: 3'- aAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 113817 | 0.77 | 0.995699 |
Target: 5'- -gUAUgUAUAUAUAGUUUAGGUGUUAa -3' miRNA: 3'- aaGUAaGUAUAUAUCAAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 15498 | 0.78 | 0.994909 |
Target: 5'- -aCAUgugagugUAUAUAUAGUUUAGGUGUUAa -3' miRNA: 3'- aaGUAa------GUAUAUAUCAAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 75848 | 0.78 | 0.994004 |
Target: 5'- -cCGUUUGUAUAUAGUUCAGGUaUUAa -3' miRNA: 3'- aaGUAAGUAUAUAUCAAGUCCAcAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 80091 | 0.78 | 0.994004 |
Target: 5'- aUUUAUUUGUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- -AAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 52360 | 0.78 | 0.994004 |
Target: 5'- aUUUAUUUGUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- -AAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 90629 | 0.79 | 0.990495 |
Target: 5'- aUUGUUCAUAUAUAaUUUAGGUGUUAa -3' miRNA: 3'- aAGUAAGUAUAUAUcAAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 151324 | 0.79 | 0.987375 |
Target: 5'- cUC-UUCAUAUAUAGUaUAGGUGUUAa -3' miRNA: 3'- aAGuAAGUAUAUAUCAaGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 184773 | 0.79 | 0.987375 |
Target: 5'- cUCAUUUAUAUAUAGccUAGGUGUUGa -3' miRNA: 3'- aAGUAAGUAUAUAUCaaGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 169570 | 0.8 | 0.983518 |
Target: 5'- -aCAUgcgaGUGUAUAGUUUAGGUGUUAa -3' miRNA: 3'- aaGUAag--UAUAUAUCAAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 170612 | 0.8 | 0.983518 |
Target: 5'- cUUAUUUAUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- aAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 131983 | 0.81 | 0.973221 |
Target: 5'- aUCuGUUCAUAUAUAGcUUAGGUGUUAa -3' miRNA: 3'- aAG-UAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 45115 | 0.81 | 0.966607 |
Target: 5'- cUUGUUCGUAUAUAGcUUAGGUGUUAu -3' miRNA: 3'- aAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
|||||||
28258 | 5' | -41.1 | NC_005902.1 | + | 157058 | 0.82 | 0.945235 |
Target: 5'- aUUCGUUUGUGUAUAGcUUAGGUGUUAa -3' miRNA: 3'- -AAGUAAGUAUAUAUCaAGUCCACAAU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home