Results 21 - 40 of 71 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 21744 | 0.83 | 0.10548 |
Target: 5'- -gCGAGUaUAGGCCGGCUUGAGCCGu -3' miRNA: 3'- uaGUUCAgAUCUGGCCGAACUCGGUu -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 20197 | 0.94 | 0.02155 |
Target: 5'- uAUCGAGUCcAGACCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 20137 | 0.92 | 0.02578 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 20072 | 0.82 | 0.132349 |
Target: 5'- uAUCGAGUCcAGGUCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 20027 | 0.94 | 0.02155 |
Target: 5'- uAUCGAGUCcAGACCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19962 | 0.92 | 0.02578 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19897 | 0.92 | 0.02578 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19852 | 0.94 | 0.02155 |
Target: 5'- uAUCGAGUCcAGACCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19787 | 0.92 | 0.02578 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19742 | 0.92 | 0.02578 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19677 | 0.68 | 0.713976 |
Target: 5'- uAUCGAGUCcAGGUCGuCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCcGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19632 | 0.94 | 0.02155 |
Target: 5'- uAUCGAGUCcAGACCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19588 | 0.83 | 0.118206 |
Target: 5'- uAUCGAGUCcaaGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaucUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 19523 | 0.8 | 0.174758 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGaCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUcGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 17931 | 0.71 | 0.592444 |
Target: 5'- -aCAuAGUCUAGGCUGGCUUGGGagGAa -3' miRNA: 3'- uaGU-UCAGAUCUGGCCGAACUCggUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 17931 | 0.73 | 0.474628 |
Target: 5'- --aAAGUCcAGuCCGGUUUGGGCCAAg -3' miRNA: 3'- uagUUCAGaUCuGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 17869 | 0.77 | 0.267699 |
Target: 5'- uAUCGAGUUUAGcUCGGCUUGuGCCGAg -3' miRNA: 3'- -UAGUUCAGAUCuGGCCGAACuCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 17824 | 0.96 | 0.014598 |
Target: 5'- uAUCGAGUUUAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGAUCUGGCCGAACUCGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 17779 | 0.69 | 0.692181 |
Target: 5'- uAUCGAaUCcAGGCCGGCUUGGaCCAAg -3' miRNA: 3'- -UAGUUcAGaUCUGGCCGAACUcGGUU- -5' |
|||||||
28307 | 5' | -53.5 | NC_005905.1 | + | 17714 | 0.92 | 0.02578 |
Target: 5'- uAUCGAGUCcAGGCCGGCUUGGGCCAAg -3' miRNA: 3'- -UAGUUCAGaUCUGGCCGAACUCGGUU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home