Results 21 - 40 of 58 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17034 | 0.82 | 0.224588 |
Target: 5'- ---cGGCUCAAGCCGGgCUGGACUc- -3' miRNA: 3'- ccaaCCGAGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17144 | 0.72 | 0.665431 |
Target: 5'- ---cGGCcCAAGCCGGgCUGGACUc- -3' miRNA: 3'- ccaaCCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17200 | 0.68 | 0.862849 |
Target: 5'- aGGUUGGCUUggGCCaagCUAG-CUUc -3' miRNA: 3'- -CCAACCGAGuuCGGccaGAUCuGAAc -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17310 | 0.68 | 0.862849 |
Target: 5'- aGGUUGGCUUggGCCaagCUAG-CUUc -3' miRNA: 3'- -CCAACCGAGuuCGGccaGAUCuGAAc -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17420 | 0.68 | 0.862849 |
Target: 5'- aGGUUGGCUUggGCCaagCUAG-CUUc -3' miRNA: 3'- -CCAACCGAGuuCGGccaGAUCuGAAc -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17530 | 0.68 | 0.862849 |
Target: 5'- aGGUUGGCUUggGCCaagCUAG-CUUc -3' miRNA: 3'- -CCAACCGAGuuCGGccaGAUCuGAAc -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17537 | 0.74 | 0.577996 |
Target: 5'- -cUUGGUcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17602 | 0.77 | 0.414713 |
Target: 5'- -cUUGGCcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 17667 | 0.69 | 0.819449 |
Target: 5'- -cUUGGUcCAAGCCGGcCUGGAUUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19410 | 0.74 | 0.577996 |
Target: 5'- -cUUGGUcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19475 | 0.71 | 0.729961 |
Target: 5'- -cUUGGCcCAAGCCGGcUUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19520 | 0.85 | 0.142119 |
Target: 5'- -cUUGGCcCAAGCCGGUCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCAGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19630 | 0.77 | 0.414713 |
Target: 5'- -cUUGGCcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19675 | 0.77 | 0.414713 |
Target: 5'- -cUUGGCcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19740 | 0.85 | 0.142119 |
Target: 5'- -cUUGGCcCAAGCCGGUCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCAGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19785 | 0.77 | 0.414713 |
Target: 5'- -cUUGGCcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19850 | 0.77 | 0.414713 |
Target: 5'- -cUUGGCcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 19915 | 0.85 | 0.142119 |
Target: 5'- -cUUGGCcCAAGCCGGUCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCAGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 20024 | 0.77 | 0.414713 |
Target: 5'- -cUUGGCcCAAGCCGGcCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCaGAUCUGAac -5' |
|||||||
28328 | 3' | -51.9 | NC_005905.1 | + | 20084 | 0.85 | 0.142119 |
Target: 5'- -cUUGGCcCAAGCCGGUCUGGACUc- -3' miRNA: 3'- ccAACCGaGUUCGGCCAGAUCUGAac -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home