miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28353	5'	-57.3	NC_005946.1	+	59837	0.67	0.756943
	Target:  5'- cGAGAgcgUCUCCUgGAGCuuGACG-GCc -3' miRNA:   3'- cCUCU---GGAGGAgUUCGggCUGCuCGa -5'
28353	5'	-57.3	NC_005946.1	+	61174	0.67	0.756943
	Target:  5'- gGGGGACCgUCCUgGAcCCCGugGAc-- -3' miRNA:   3'- -CCUCUGG-AGGAgUUcGGGCugCUcga -5'
28353	5'	-57.3	NC_005946.1	+	74507	0.66	0.766562
	Target:  5'- cGGcGGCCUCCUCcucGGCCuCGACcuGGUUg -3' miRNA:   3'- -CCuCUGGAGGAGu--UCGG-GCUGc-UCGA- -5'
28353	5'	-57.3	NC_005946.1	+	28654	0.66	0.785423
	Target:  5'- gGGGGGCCg--UC-AGCCUGuCGAGCUu -3' miRNA:   3'- -CCUCUGGaggAGuUCGGGCuGCUCGA- -5'
28353	5'	-57.3	NC_005946.1	+	10285	0.66	0.785423
	Target:  5'- gGGAGcGCCggggCAuAGUCCGACGGGCa -3' miRNA:   3'- -CCUC-UGGaggaGU-UCGGGCUGCUCGa -5'
28353	5'	-57.3	NC_005946.1	+	35162	0.66	0.785423
	Target:  5'- cGGGGgcaugucauaGCCUCCagggcagcacUCAAGCCUGACGGa-- -3' miRNA:   3'- -CCUC----------UGGAGG----------AGUUCGGGCUGCUcga -5'
28353	5'	-57.3	NC_005946.1	+	38750	0.66	0.80372
	Target:  5'- cGGAGACCUCCUgGgugaAGCCacuCuGGCUu -3' miRNA:   3'- -CCUCUGGAGGAgU----UCGGgcuGcUCGA- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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