miRNA display CGI

Results 21 - 27 of 27 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28567	3'	-53	NC_005946.1	+	73413	0.7	0.738749
	Target:  5'- gCAACGcCAAGGgcUCCAAGGAGGacuaCgUCa -3' miRNA:   3'- -GUUGCaGUUUC--AGGUUCCUCCg---GgAG- -5'
28567	3'	-53	NC_005946.1	+	77298	0.68	0.859768
	Target:  5'- gAGgGUCGcaGAGcUCGAGGAGGCUUUCg -3' miRNA:   3'- gUUgCAGU--UUCaGGUUCCUCCGGGAG- -5'
28567	3'	-53	NC_005946.1	+	82931	0.66	0.943586
	Target:  5'- aAACGcuuacUCcAGG-CaCAGGGAGGCCUUCa -3' miRNA:   3'- gUUGC-----AGuUUCaG-GUUCCUCCGGGAG- -5'
28567	3'	-53	NC_005946.1	+	93871	0.67	0.910328
	Target:  5'- gCAGCGguagaAGAGcCCAGGGgacAGGCCUUUa -3' miRNA:   3'- -GUUGCag---UUUCaGGUUCC---UCCGGGAG- -5'
28567	3'	-53	NC_005946.1	+	94724	0.72	0.663851
	Target:  5'- gCAcCGUCcucccagAGGGuUCCAcGGGGGCCCUCa -3' miRNA:   3'- -GUuGCAG-------UUUC-AGGUuCCUCCGGGAG- -5'
28567	3'	-53	NC_005946.1	+	99885	0.68	0.850754
	Target:  5'- gGugGUCAuGGUCCucAGGAacucgucaaucauGGUCCUCu -3' miRNA:   3'- gUugCAGUuUCAGGu-UCCU-------------CCGGGAG- -5'
28567	3'	-53	NC_005946.1	+	102277	0.71	0.695886
	Target:  5'- gGGCGUCAGAGUCUAuggucauGGGGGcGUCCg- -3' miRNA:   3'- gUUGCAGUUUCAGGU-------UCCUC-CGGGag -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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