miRNA display CGI

Results 41 - 47 of 47 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
28770	3'	-55.5	NC_006146.1	+	153617	0.67	0.873783
	Target:  5'- uGGGGGUCG-GGCUGgcCUGCcagGggGCa -3' miRNA:   3'- -CCCCCAGCgUCGAU--GACGcgaCuuUG- -5'
28770	3'	-55.5	NC_006146.1	+	154201	0.67	0.9074
	Target:  5'- cGGGGcGUCGUGGac-CUGCGuCUGGcuGGCg -3' miRNA:   3'- -CCCC-CAGCGUCgauGACGC-GACU--UUG- -5'
28770	3'	-55.5	NC_006146.1	+	154680	0.7	0.772599
	Target:  5'- cGGGGGgCGCuGCUGCUGgGUggucuGCg -3' miRNA:   3'- -CCCCCaGCGuCGAUGACgCGacuu-UG- -5'
28770	3'	-55.5	NC_006146.1	+	156694	0.67	0.873783
	Target:  5'- uGGGGGUCG-GGCUGgcCUGCcagGggGCa -3' miRNA:   3'- -CCCCCAGCgUCGAU--GACGcgaCuuUG- -5'
28770	3'	-55.5	NC_006146.1	+	156729	0.66	0.919215
	Target:  5'- cGGGGGUC-CAGCcug-GCGCaGAcGCu -3' miRNA:   3'- -CCCCCAGcGUCGaugaCGCGaCUuUG- -5'
28770	3'	-55.5	NC_006146.1	+	159368	0.66	0.919215
	Target:  5'- cGGGGG-CGUAGCUgaccgccaGCUcgcaggccGCGCUGuccACg -3' miRNA:   3'- -CCCCCaGCGUCGA--------UGA--------CGCGACuu-UG- -5'
28770	3'	-55.5	NC_006146.1	+	161748	0.69	0.794759
	Target:  5'- cGGGGGUgGCGGCUgagguccgagggggcGcCUGgGCgGggGCc -3' miRNA:   3'- -CCCCCAgCGUCGA---------------U-GACgCGaCuuUG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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