Results 41 - 60 of 69 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136058 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136151 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 137266 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 137173 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 137080 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136987 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136894 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136801 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136616 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136523 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136430 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136337 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 136244 | 0.74 | 0.851979 |
Target: 5'- --cUCCGGCGGGgGGUGgcCGggccGCUGCCg -3' miRNA: 3'- gauAGGCCGCCCaUCAU--GUa---UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 161557 | 0.7 | 0.974952 |
Target: 5'- ---aCCaGCaaacccuaguuGGGUAGUAUGUACUACCc -3' miRNA: 3'- gauaGGcCG-----------CCCAUCAUGUAUGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 162957 | 0.72 | 0.926928 |
Target: 5'- gCUAUCUuaauaGCGGGUAGcAUAUACUAUCc -3' miRNA: 3'- -GAUAGGc----CGCCCAUCaUGUAUGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 163357 | 0.73 | 0.909399 |
Target: 5'- uUAUCCuGauauguuaGGGUAGUAUAUGCUAUCc -3' miRNA: 3'- gAUAGGcCg-------CCCAUCAUGUAUGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 101830 | 0.73 | 0.903055 |
Target: 5'- -aGUUCGGCGGGgcccgAGcGCucggGCUGCCg -3' miRNA: 3'- gaUAGGCCGCCCa----UCaUGua--UGAUGG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 162903 | 0.74 | 0.859956 |
Target: 5'- gCUAUCCuaguacaGCuGGGUAGUAUAUGCUGuCCu -3' miRNA: 3'- -GAUAGGc------CG-CCCAUCAUGUAUGAU-GG- -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 10389 | 0.75 | 0.826815 |
Target: 5'- -gGUCgCGGCucaGGGUGGUGCuGUGCUACa -3' miRNA: 3'- gaUAG-GCCG---CCCAUCAUG-UAUGAUGg -5' |
|||||||
28942 | 5' | -49.9 | NC_006146.1 | + | 57932 | 0.66 | 0.998515 |
Target: 5'- gCUggCCGGCGccgccauGGUGcUGCAUcaccACUGCCa -3' miRNA: 3'- -GAuaGGCCGC-------CCAUcAUGUA----UGAUGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home