Results 81 - 100 of 336 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 136950 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 137229 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 137415 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 137508 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 64625 | 0.67 | 0.743725 |
Target: 5'- -uGGCGcAGGCCAggaggaugucuUCCgCCGGGGCcaggggcacgucGCCg -3' miRNA: 3'- agUCGU-UCCGGU-----------AGGgGGCCUCG------------UGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 169681 | 0.67 | 0.743725 |
Target: 5'- --cGCGuGGCCcgCCCCCGGgucuucccgGGCuCCc -3' miRNA: 3'- aguCGUuCCGGuaGGGGGCC---------UCGuGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 99646 | 0.67 | 0.743725 |
Target: 5'- -aGGCGuagAGGCCGcCCCCCgccaggccccaGGAGUugACCa -3' miRNA: 3'- agUCGU---UCCGGUaGGGGG-----------CCUCG--UGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 136021 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 136393 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 48137 | 0.67 | 0.743725 |
Target: 5'- -gAGUucGGCCAgCCCCCGcucGUACCc -3' miRNA: 3'- agUCGuuCCGGUaGGGGGCcu-CGUGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 45721 | 0.67 | 0.743725 |
Target: 5'- gCAGCGGGGCCAcgaCCCUGaccuGGC-CCa -3' miRNA: 3'- aGUCGUUCCGGUag-GGGGCc---UCGuGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 167817 | 0.67 | 0.743725 |
Target: 5'- --cGCGuGGCCcgCCCCCGGgucuucccgGGCuCCc -3' miRNA: 3'- aguCGUuCCGGuaGGGGGCC---------UCGuGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 135185 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 135557 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 135464 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 135371 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 30203 | 0.67 | 0.743725 |
Target: 5'- aCAGCcagAGGGCCGcugcgCCCgCCGG-GCugGCCg -3' miRNA: 3'- aGUCG---UUCCGGUa----GGG-GGCCuCG--UGG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 136300 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 136207 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
|||||||
29021 | 3' | -59.5 | NC_006146.1 | + | 136114 | 0.67 | 0.743725 |
Target: 5'- -gGGCcgGGGGCCGggugCCCCUGGGuccGCugCc -3' miRNA: 3'- agUCG--UUCCGGUa---GGGGGCCU---CGugG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home