Results 21 - 25 of 25 are showing below:
Show page:
<< Previous Page | Next Page >>
| ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# |
P value
|
| Predicted miRNA align pattern | |||||||
| 31805 | 3' | -60.1 | NC_006938.1 | + | 41502 | 0.66 | 0.494479 |
|
Target: 5'- gCCGCcGCGCagccGCUcccUGCUGACguGGCg- -3' miRNA: 3'- -GGUGcCGCG----CGA---ACGACUGguCCGgu -5' |
|||||||
| 31805 | 3' | -60.1 | NC_006938.1 | + | 25903 | 0.66 | 0.504457 |
|
Target: 5'- cUCGCGGaCGUGCUggcagccGUUGGCCacgaucguucGGGCCu -3' miRNA: 3'- -GGUGCC-GCGCGAa------CGACUGG----------UCCGGu -5' |
|||||||
| 31805 | 3' | -60.1 | NC_006938.1 | + | 33399 | 0.66 | 0.504457 |
|
Target: 5'- aCC-CGGCGCGCUUGUcGGCgCGuGuCCAc -3' miRNA: 3'- -GGuGCCGCGCGAACGaCUG-GUcC-GGU- -5' |
|||||||
| 31805 | 3' | -60.1 | NC_006938.1 | + | 29718 | 0.66 | 0.504457 |
|
Target: 5'- cCCAUGGCuucugGUGCcagcggGCgcggGugCAGGCCGg -3' miRNA: 3'- -GGUGCCG-----CGCGaa----CGa---CugGUCCGGU- -5' |
|||||||
| 31805 | 3' | -60.1 | NC_006938.1 | + | 7189 | 0.66 | 0.504457 |
|
Target: 5'- aCAagaGaGCGCGUccgcGUUGACCAGGCgCAg -3' miRNA: 3'- gGUg--C-CGCGCGaa--CGACUGGUCCG-GU- -5' |
|||||||
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home