Results 41 - 60 of 420 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 106798 | 0.66 | 0.548731 |
Target: 5'- ----gGGCGGaugacgGCcgCGCUGCCCGcCGGc -3' miRNA: 3'- cagagCCGCCg-----CGa-GCGACGGGC-GCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 32708 | 0.66 | 0.51213 |
Target: 5'- cGUCUCGGC-GCGCUUcauggaGCgccucucggccuccgGCCgGCGGc -3' miRNA: 3'- -CAGAGCCGcCGCGAG------CGa--------------CGGgCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 36521 | 0.66 | 0.548731 |
Target: 5'- ---gCGGCGGUGUgcaCGCUGCgCgagGCGGa -3' miRNA: 3'- cagaGCCGCCGCGa--GCGACGgG---CGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 87091 | 0.66 | 0.501986 |
Target: 5'- uUCgCGGCGcGCGCggacucgCGCUGUuuCCGCGc -3' miRNA: 3'- cAGaGCCGC-CGCGa------GCGACG--GGCGCc -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 34519 | 0.66 | 0.529846 |
Target: 5'- ---gCGGaCGGCGCcggcgaugCGCcGCCCGcCGGg -3' miRNA: 3'- cagaGCC-GCCGCGa-------GCGaCGGGC-GCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 75368 | 0.66 | 0.552534 |
Target: 5'- cGUCUCGGCGGgcaugggcacggcacCGgaCGCgGCCaGCGa -3' miRNA: 3'- -CAGAGCCGCC---------------GCgaGCGaCGGgCGCc -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 133072 | 0.66 | 0.529846 |
Target: 5'- ---gCGG-GGCGCUCGCcGCCaccgcuGCGGc -3' miRNA: 3'- cagaGCCgCCGCGAGCGaCGGg-----CGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 33651 | 0.66 | 0.548731 |
Target: 5'- ----aGGCGcGCGCgCGCgUGgCCGCGGc -3' miRNA: 3'- cagagCCGC-CGCGaGCG-ACgGGCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 59615 | 0.66 | 0.548731 |
Target: 5'- --aUCGcGCGGUGCgccgugCGCUGCUuCGCGc -3' miRNA: 3'- cagAGC-CGCCGCGa-----GCGACGG-GCGCc -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 32759 | 0.66 | 0.529846 |
Target: 5'- uUCgcgGGCGGCGCuUCGCgacgGCCgGCc- -3' miRNA: 3'- cAGag-CCGCCGCG-AGCGa---CGGgCGcc -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 100996 | 0.66 | 0.548731 |
Target: 5'- -cCUCGcGCaGcGCGCUCGCcGCggcggccaCCGCGGc -3' miRNA: 3'- caGAGC-CG-C-CGCGAGCGaCG--------GGCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 42484 | 0.66 | 0.548731 |
Target: 5'- ----gGGCGGCGCgccgaagCGCUGCgggcgaaaCCGcCGGg -3' miRNA: 3'- cagagCCGCCGCGa------GCGACG--------GGC-GCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 29481 | 0.66 | 0.548731 |
Target: 5'- -cCUgGGCgcuGGCGCgcgCGCUguucaGCCCGcCGGc -3' miRNA: 3'- caGAgCCG---CCGCGa--GCGA-----CGGGC-GCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 102923 | 0.66 | 0.53926 |
Target: 5'- gGUC-CGGCGccccGCGCcccgGCcccGCCCGCGGg -3' miRNA: 3'- -CAGaGCCGC----CGCGag--CGa--CGGGCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 35933 | 0.66 | 0.548731 |
Target: 5'- ---gUGGCGGCGC--GCcGCCgCGCGGc -3' miRNA: 3'- cagaGCCGCCGCGagCGaCGG-GCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 119260 | 0.66 | 0.520493 |
Target: 5'- ---aUGGCGGCGCcCGCgcgGCUCGUcgaGGg -3' miRNA: 3'- cagaGCCGCCGCGaGCGa--CGGGCG---CC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 67700 | 0.66 | 0.548731 |
Target: 5'- cUCUCGGCgaGGUGCUCGagcGCgCCGUa- -3' miRNA: 3'- cAGAGCCG--CCGCGAGCga-CG-GGCGcc -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 14063 | 0.66 | 0.548731 |
Target: 5'- uUCgCGGcCGGUGCUUggGCcGCUCGUGGa -3' miRNA: 3'- cAGaGCC-GCCGCGAG--CGaCGGGCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 65914 | 0.66 | 0.53926 |
Target: 5'- uUUUCGccgucGCGGCGUcggCGUUcCCCGCGGa -3' miRNA: 3'- cAGAGC-----CGCCGCGa--GCGAcGGGCGCC- -5' |
|||||||
6498 | 5' | -64.1 | NC_001847.1 | + | 96997 | 0.66 | 0.528908 |
Target: 5'- cUCggGGCGGCGCgccgcgcgaagacUCGgUGCCCgGCGc -3' miRNA: 3'- cAGagCCGCCGCG-------------AGCgACGGG-CGCc -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home