Results 41 - 43 of 43 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand |
Start Position![]() |
R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
8111 | 3' | -52.3 | NC_001978.2 | + | 39096 | 0.66 | 0.789314 |
Target: 5'- gAUUACGUCGGGCucgaacucgaagGGUCCGGUaaggggaGUGGUCg -3' miRNA: 3'- -UGGUGUAGCUUG------------CUAGGCCG-------UAUCGG- -5' |
|||||||
8111 | 3' | -52.3 | NC_001978.2 | + | 40127 | 0.66 | 0.80041 |
Target: 5'- cGCC-CAUCGAGaagcgcgcuuCGAUCacgugGGCGaAGCCg -3' miRNA: 3'- -UGGuGUAGCUU----------GCUAGg----CCGUaUCGG- -5' |
|||||||
8111 | 3' | -52.3 | NC_001978.2 | + | 40639 | 0.72 | 0.480537 |
Target: 5'- cCCAgGgUUGAGCGA-CCGGCGUuGCCu -3' miRNA: 3'- uGGUgU-AGCUUGCUaGGCCGUAuCGG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home