miRNA display CGI

Results 1 - 8 of 8 are showing below:
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ID	Location	Perfect MFE.*	RefSeq Acc.	strand	Start Position	R_P_ratio#	P value
	Predicted miRNA align pattern
8247	3'	-50.3	NC_001987.1	+	100882	0.66	0.989985
	Target:  5'- aUCAGGAC--ACAGGCAGC--UCCUa -3' miRNA:   3'- cGGUUCUGuuUGUCCGUUGcuAGGGg -5'
8247	3'	-50.3	NC_001987.1	+	54296	0.66	0.989985
	Target:  5'- cCCAGGcaGCAAAUAGGUaaaaacuggGACGAUgCCa -3' miRNA:   3'- cGGUUC--UGUUUGUCCG---------UUGCUAgGGg -5'
8247	3'	-50.3	NC_001987.1	+	98809	0.66	0.985216
	Target:  5'- -aCAGGaACAAGCAGGCAcaACcugCUCCg -3' miRNA:   3'- cgGUUC-UGUUUGUCCGU--UGcuaGGGG- -5'
8247	3'	-50.3	NC_001987.1	+	548	0.67	0.978884
	Target:  5'- aGUUcGGACAGugAGGaagaaaGGUCCCCu -3' miRNA:   3'- -CGGuUCUGUUugUCCguug--CUAGGGG- -5'
8247	3'	-50.3	NC_001987.1	+	80902	0.67	0.976119
	Target:  5'- aGUC-AGGCAcuucaacAAUAGGCAAagaaGAUCCUCu -3' miRNA:   3'- -CGGuUCUGU-------UUGUCCGUUg---CUAGGGG- -5'
8247	3'	-50.3	NC_001987.1	+	89601	0.68	0.967575
	Target:  5'- uCCAAGACGAGCuuGGGCAAU--UCCa- -3' miRNA:   3'- cGGUUCUGUUUG--UCCGUUGcuAGGgg -5'
8247	3'	-50.3	NC_001987.1	+	43363	0.74	0.757467
	Target:  5'- -aCAGGcACAugaagcuauuuGAUAGGUAGCGGUCCCUg -3' miRNA:   3'- cgGUUC-UGU-----------UUGUCCGUUGCUAGGGG- -5'
8247	3'	-50.3	NC_001987.1	+	73914	1.14	0.003571
	Target:  5'- gGCCAAGACAAACAGGCAACGAUCCCCc -3' miRNA:   3'- -CGGUUCUGUUUGUCCGUUGCUAGGGG- -5'

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Note:
      When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.

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