Results 21 - 40 of 65 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 11132 | 0.86 | 0.496029 |
Target: 5'- gUUUAaUACAUGAUCUUUGCUUUCGUCg -3' miRNA: 3'- -AAGUcAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 52898 | 0.86 | 0.496029 |
Target: 5'- uUUUAGUACAUcAUCUUUGCUUUCAUCc -3' miRNA: 3'- -AAGUCAUGUGcUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 10709 | 0.88 | 0.423774 |
Target: 5'- -cUAGUACuCGAUCUUUGCUUUCGUCc -3' miRNA: 3'- aaGUCAUGuGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 11036 | 0.88 | 0.423774 |
Target: 5'- -cUAGUACuCGAUCUUUGCUUUCGUCc -3' miRNA: 3'- aaGUCAUGuGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 11639 | 0.88 | 0.41397 |
Target: 5'- aUUCuAGUACAUGAUgUUUGCUUUCAUCg -3' miRNA: 3'- -AAG-UCAUGUGCUAgAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 120230 | 0.88 | 0.404307 |
Target: 5'- ----aUACACGAUCUUUGCUUUCGUCg -3' miRNA: 3'- aagucAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 105407 | 0.89 | 0.376191 |
Target: 5'- cUUUAaUACACGAUCUUUGCUUUCAUCc -3' miRNA: 3'- -AAGUcAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 53238 | 0.89 | 0.367117 |
Target: 5'- uUUCAaUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- -AAGUcAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 105287 | 0.9 | 0.349424 |
Target: 5'- -cUAGUACAUGAUCUUUGCUUUCGUa -3' miRNA: 3'- aaGUCAUGUGCUAGAAACGAAAGUAg -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 11570 | 0.91 | 0.307898 |
Target: 5'- -cUAGUACuCGAUCUUUGCUUUCAUCg -3' miRNA: 3'- aaGUCAUGuGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 104764 | 0.91 | 0.292375 |
Target: 5'- uUUCAaUACAUGAUCUUUGCUUUCGUCa -3' miRNA: 3'- -AAGUcAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 10817 | 0.91 | 0.292375 |
Target: 5'- -cUAGUACACGAUgUUUGCUUUCGUCg -3' miRNA: 3'- aaGUCAUGUGCUAgAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 52978 | 0.92 | 0.284846 |
Target: 5'- uUUUAGUACACcAUCUUUGCUUUCAUCg -3' miRNA: 3'- -AAGUCAUGUGcUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 42065 | 0.92 | 0.284846 |
Target: 5'- aUUUAGUACuCGAUCUUUGCUUUCGUCc -3' miRNA: 3'- -AAGUCAUGuGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 11167 | 0.92 | 0.277471 |
Target: 5'- -gCAGaaaUGCACGAUCUUUGCUUUCGUCg -3' miRNA: 3'- aaGUC---AUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 41869 | 0.94 | 0.211936 |
Target: 5'- uUUCA-UACACGAUCUUUGCUUUCAUCg -3' miRNA: 3'- -AAGUcAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 71832 | 0.95 | 0.200541 |
Target: 5'- aUUCuAGUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- -AAG-UCAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 52860 | 0.95 | 0.200541 |
Target: 5'- aUUCuAGUACAUGAUCUUUGCUUUCGUCc -3' miRNA: 3'- -AAG-UCAUGUGCUAGAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 52662 | 0.96 | 0.174368 |
Target: 5'- uUUUAGUACACGAUgUUUGCUUUCAUCg -3' miRNA: 3'- -AAGUCAUGUGCUAgAAACGAAAGUAG- -5' |
|||||||
8552 | 3' | -44.4 | NC_002169.1 | + | 11230 | 0.97 | 0.155665 |
Target: 5'- -cUAGUACAUGAUCUUUGCUUUCGUCg -3' miRNA: 3'- aaGUCAUGUGCUAGAAACGAAAGUAG- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home