Results 41 - 60 of 327 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position |
R_P_ratio![]() |
P value |
Predicted miRNA align pattern | |||||||
9085 | 3' | -64 | NC_002512.2 | + | 35226 | 0.66 | 0.632753 |
Target: 5'- uGGGCGuGCagGaCCGCCCGAUCGGagaagaGGAc -3' miRNA: 3'- -UUCGCuCGg-C-GGCGGGCUGGCUg-----CCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 77957 | 0.66 | 0.632753 |
Target: 5'- -cGCGAGCCGgguUCGUCUcgggGACCGACGa- -3' miRNA: 3'- uuCGCUCGGC---GGCGGG----CUGGCUGCcu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 207758 | 0.66 | 0.661108 |
Target: 5'- gGGGUgGAGCCGCCGCCguggUGGuuG-CGGGa -3' miRNA: 3'- -UUCG-CUCGGCGGCGG----GCUggCuGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 183513 | 0.66 | 0.670529 |
Target: 5'- aGGGgGAgGCCGUccuCGCCUGGCUG-CGGAc -3' miRNA: 3'- -UUCgCU-CGGCG---GCGGGCUGGCuGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 15116 | 0.66 | 0.642214 |
Target: 5'- aGGGCGA-CCGgCGCCgGACugCGACGGc -3' miRNA: 3'- -UUCGCUcGGCgGCGGgCUG--GCUGCCu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 4593 | 0.66 | 0.651668 |
Target: 5'- gAGGCGGcGCCGCgGgCCGcgaGACGGAc -3' miRNA: 3'- -UUCGCU-CGGCGgCgGGCuggCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 76899 | 0.66 | 0.661108 |
Target: 5'- -cGCuc-CCGCCGaCCCGACCGG-GGAc -3' miRNA: 3'- uuCGcucGGCGGC-GGGCUGGCUgCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 34279 | 0.66 | 0.670529 |
Target: 5'- cAGCaGGUgGCCGCCCcGCCGAgGuGAc -3' miRNA: 3'- uUCGcUCGgCGGCGGGcUGGCUgC-CU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 57034 | 0.66 | 0.670529 |
Target: 5'- gGAGCGgaGGCCG-CGUCCGAcgaCCGGgGGGc -3' miRNA: 3'- -UUCGC--UCGGCgGCGGGCU---GGCUgCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 76924 | 0.66 | 0.661108 |
Target: 5'- -cGCuc-CCGCCGaCCCGACCGG-GGAc -3' miRNA: 3'- uuCGcucGGCGGC-GGGCUGGCUgCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 48299 | 0.66 | 0.661108 |
Target: 5'- -cGCGGacCCGCCGCCCcuGCCgccgcaGACGGAc -3' miRNA: 3'- uuCGCUc-GGCGGCGGGc-UGG------CUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 76849 | 0.66 | 0.661108 |
Target: 5'- -cGCuc-CCGCCGaCCCGACCGG-GGAc -3' miRNA: 3'- uuCGcucGGCGGC-GGGCUGGCUgCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 76874 | 0.66 | 0.661108 |
Target: 5'- -cGCuc-CCGCCGaCCCGACCGG-GGAc -3' miRNA: 3'- uuCGcucGGCGGC-GGGCUGGCUgCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 135212 | 0.66 | 0.642214 |
Target: 5'- cAGCGGGCCgggggGCCcCCCGGCCc-CGGGc -3' miRNA: 3'- uUCGCUCGG-----CGGcGGGCUGGcuGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 134253 | 0.66 | 0.659222 |
Target: 5'- cGGcCGAGCCGCCcCCUGGCCuucgucguccgcGCGGGg -3' miRNA: 3'- uUC-GCUCGGCGGcGGGCUGGc-----------UGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 80887 | 0.66 | 0.661108 |
Target: 5'- -cGCG-GCgGCCcCCCGGCCGGUGGu -3' miRNA: 3'- uuCGCuCGgCGGcGGGCUGGCUGCCu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 82322 | 0.66 | 0.661108 |
Target: 5'- uAGaGGGCCGCgGgCCGccCCGGCGGGu -3' miRNA: 3'- uUCgCUCGGCGgCgGGCu-GGCUGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 39807 | 0.66 | 0.661108 |
Target: 5'- cAGcCGAGcCCGCUGaCCGGCCG-CGGc -3' miRNA: 3'- uUC-GCUC-GGCGGCgGGCUGGCuGCCu -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 75143 | 0.66 | 0.661108 |
Target: 5'- -cGCGAcGCCGUCGgaCgCGGCCG-CGGAc -3' miRNA: 3'- uuCGCU-CGGCGGCg-G-GCUGGCuGCCU- -5' |
|||||||
9085 | 3' | -64 | NC_002512.2 | + | 227319 | 0.66 | 0.679923 |
Target: 5'- gGAGaCGcGCCGgCGCCCGAggaagggGACGGAg -3' miRNA: 3'- -UUC-GCuCGGCgGCGGGCUgg-----CUGCCU- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home