Results 21 - 25 of 25 are showing below:
Show page:
<< Previous Page | Next Page >>
ID | Location | Perfect MFE.* | RefSeq Acc. | strand | Start Position | R_P_ratio# | P value |
Predicted miRNA align pattern | |||||||
9365 | 5' | -54.6 | NC_002512.2 | + | 77135 | 0.66 | 0.978569 |
Target: 5'- aGACCUCGC-CGUCGGgGGa------ -3' miRNA: 3'- aCUGGGGCGaGCAGUCgCCaaaaguc -5' |
|||||||
9365 | 5' | -54.6 | NC_002512.2 | + | 150139 | 0.66 | 0.978569 |
Target: 5'- -cACCCCGCUCGugUCGGCGuccgcCAGc -3' miRNA: 3'- acUGGGGCGAGC--AGUCGCcaaaaGUC- -5' |
|||||||
9365 | 5' | -54.6 | NC_002512.2 | + | 128397 | 0.66 | 0.980733 |
Target: 5'- gGACCCCGuCUCGagcccggUGGCGGgg-UCGc -3' miRNA: 3'- aCUGGGGC-GAGCa------GUCGCCaaaAGUc -5' |
|||||||
9365 | 5' | -54.6 | NC_002512.2 | + | 218209 | 0.66 | 0.980733 |
Target: 5'- gGGcCCCCGcCUCGggccgCGGCGGgccgCGGc -3' miRNA: 3'- aCU-GGGGC-GAGCa----GUCGCCaaaaGUC- -5' |
|||||||
9365 | 5' | -54.6 | NC_002512.2 | + | 202109 | 0.66 | 0.980733 |
Target: 5'- cGACCgCGUccUCGUCAGCuGGUggcgcCGGu -3' miRNA: 3'- aCUGGgGCG--AGCAGUCG-CCAaaa--GUC- -5' |
<< Previous Page | Next Page >>
Note:
When operating RNAhybrid, the pipeline first calculates the perfect minimum free energy (Perfect mfe *) of a putative miRNA when the entire putative miRNA binds to a perfectly complementary target site, then it calculates the minimum free energy of RNA duplex (mfe of the miRNA/mRNA duplex), abbreviated as Rd_mfe. An alignment for which the Rd_mfe to its correspondent Perfect mfe ratio (R_P_ratio #) is more than 66% is regarded as a positive alignment as described by Krek et al. (21). The P_value is calculated by RNAhybrid.
Back To miRNA display CGI home