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| GenBank Identifier | RefSeq Acc. | Name |
| 28373214 | NC_001347.2 | Human herpesvirus 5 (laboratory strain AD169) |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 1597 | + | 60192 | 88 | 19 | -28.5 | NP_039979 | 5' arm 3' arm | ||
| 1598 | + | 63428 | 88 | 20.5 | -25.1 | NP_783786 | 5' arm 3' arm | ||
| 1599 | + | 63564 | 89 | 21 | -21.9 | NP_783786 | 5' arm 3' arm | ||
| 1600 | + | 65848 | 89 | 20 | -20.1 | NP_039982 | 5' arm 3' arm | ||
| 1601 | + | 66443 | 89 | 22 | -24.9 | NP_039982 | 5' arm 3' arm | ||
| 1602 | + | 68509 | 85 | 21 | -21.22 | NP_039982 | 5' arm 3' arm | ||
| 1603 | + | 71853 | 88 | 19 | -21.7 | NP_039983 | 5' arm 3' arm | ||
| 1604 | + | 72013 | 88 | 20 | -24.5 | NP_039983 | 5' arm 3' arm | ||
| 1605 | + | 72195 | 90 | 19.5 | -24.3 | NP_039983 | 5' arm 3' arm | ||
| 1606 | + | 72313 | 86 | 19 | -22.3 | NP_039983 | 5' arm 3' arm | ||
| 1607 | + | 73935 | 88 | 21 | -24.5 | NP_039984 | 5' arm 3' arm | ||
| 1608 | + | 74313 | 86 | 20.5 | -22.8 | NP_039985 | 5' arm 3' arm | ||
| 1609 | + | 77371 | 89 | 21.5 | -21.9 | NP_039987 | 5' arm 3' arm | ||
| 1610 | + | 79308 | 90 | 20.5 | -31.2 | NP_039988 | 5' arm 3' arm | ||
| 1611 | + | 80761 | 88 | 20 | -21.7 | NP_039988 | 5' arm 3' arm | ||
| 1612 | + | 81887 | 87 | 21 | -24.2 | NP_039989 | 5' arm 3' arm | ||
| 1613 | + | 81993 | 86 | 20.5 | -26.7 | NP_039989 | 5' arm 3' arm | ||
| 1614 | + | 82915 | 90 | 19.5 | -24.6 | NP_039989 | 5' arm 3' arm | ||
| 1615 | + | 84574 | 86 | 20 | -25.2 | NP_039990 | 5' arm 3' arm | ||
| 1616 | + | 85360 | 90 | 20.5 | -27.3 | NP_039990 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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