miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
1577	+	41859	90	21	-22.4	NP_039966		5' arm      3' arm
1578	+	42587	89	19	-23.5	NP_039966		5' arm      3' arm
1579	+	42860	85	23	-24.5	NP_039966		5' arm      3' arm
1580	+	44534	85	20.5	-25.2			5' arm      3' arm
1581	+	44910	90	22.5	-19.9	NP_783782		5' arm      3' arm
1582	+	46117	89	20.5	-22.2	NP_039969		5' arm      3' arm
1583	+	46376	90	19	-20.4	NP_039969		5' arm      3' arm
1584	+	46959	89	20.5	-26.4	NP_039969		5' arm      3' arm
1585	+	47735	87	20	-28.6	NP_039969		5' arm      3' arm
1586	+	48524	90	22	-24.2	NP_039970		5' arm      3' arm
1587	+	48666	90	23.5	-20.5	NP_039970		5' arm      3' arm
1588	+	49320	90	19	-19.7	NP_039970		5' arm      3' arm
1589	+	49490	85	26.5	-28.7
1590	+	51374	89	21	-23.9	NP_039972		5' arm      3' arm
1591	+	52282	86	22.5	-31.5	NP_039971		5' arm      3' arm
1592	+	52495	87	21.5	-21.7	NP_039971		5' arm      3' arm
1593	+	53400	90	19.5	-20.9	NP_039974		5' arm      3' arm
1594	+	53547	88	21	-20.1	NP_039974		5' arm      3' arm
1595	+	54745	89	21	-24			5' arm      3' arm
1596	+	56823	90	22.5	-22.6	NP_039978		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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