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| GenBank Identifier | RefSeq Acc. | Name |
| 82503188 | NC_007605.1 | Human herpesvirus 4 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 33574 | - | 120097 | 90 | 19 | -21.3 | YP_401695 | 5' arm 3' arm | ||
| 33573 | - | 117680 | 86 | 19 | -22.4 | YP_401690 | 5' arm 3' arm | ||
| 33572 | - | 117241 | 90 | 20 | -24 | YP_401690 | 5' arm 3' arm | ||
| 33571 | - | 116866 | 90 | 20 | -20.1 | YP_401725 | 5' arm 3' arm | ||
| 33570 | - | 116766 | 85 | 19.5 | -23.5 | YP_401693 | 5' arm 3' arm | ||
| 33569 | - | 116326 | 89 | 23 | -21.06 | YP_401693 | 5' arm 3' arm | ||
| 33568 | - | 115984 | 89 | 23 | -21.2 | YP_401692 | 5' arm 3' arm | ||
| 33567 | - | 115339 | 89 | 21 | -21.3 | YP_401692 | 5' arm 3' arm | ||
| 33566 | - | 114763 | 90 | 21 | -21.4 | YP_401692 | 5' arm 3' arm | ||
| 33565 | - | 112164 | 90 | 21.5 | -23 | YP_401689 | 5' arm 3' arm | ||
| 33564 | - | 112059 | 87 | 21 | -24.2 | YP_401689 | 5' arm 3' arm | ||
| 33563 | - | 110539 | 90 | 23 | -28.3 | YP_401688 | 5' arm 3' arm | ||
| 33562 | - | 109779 | 90 | 19.5 | -23.8 | YP_401687 | 5' arm 3' arm | ||
| 33561 | - | 109590 | 88 | 21 | -23.1 | YP_401687 | 5' arm 3' arm | ||
| 33560 | - | 109276 | 90 | 19 | -23.9 | YP_401687 | 5' arm 3' arm | ||
| 33559 | - | 109149 | 83 | 19.5 | -25.3 | YP_401687 | 5' arm 3' arm | ||
| 33558 | - | 107227 | 89 | 21.5 | -22.5 | YP_401685 | 5' arm 3' arm | ||
| 33557 | - | 105871 | 87 | 20.5 | -23.5 | YP_401684 | 5' arm 3' arm | ||
| 33556 | - | 105205 | 89 | 23 | -29.2 | 5' arm 3' arm | |||
| 33555 | - | 103597 | 90 | 22 | -22.7 | YP_401682 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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