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| GenBank Identifier | RefSeq Acc. | Name |
| 38639896 | NC_005261.1 | Bovine herpesvirus 5 |
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ID
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strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 23777 | - | 68679 | 89 | 19 | -24.6 | NP_954927 | 5' arm 3' arm | ||
| 23776 | - | 68426 | 86 | 20 | -23.6 | 5' arm 3' arm | |||
| 23775 | - | 68123 | 89 | 19.5 | -26.2 | NP_954926 | 5' arm 3' arm | ||
| 23774 | - | 66830 | 89 | 22.5 | -22.4 | NP_954926 | 5' arm 3' arm | ||
| 23773 | - | 66652 | 90 | 19 | -25.3 | NP_954926 | 5' arm 3' arm | ||
| 23772 | - | 64502 | 88 | 21.5 | -25.3 | NP_954924 | 5' arm 3' arm | ||
| 23771 | - | 63778 | 88 | 21.5 | -27.2 | NP_954923 | 5' arm 3' arm | ||
| 23770 | - | 63064 | 90 | 21 | -25.7 | NP_954923 | 5' arm 3' arm | ||
| 23769 | - | 60935 | 90 | 19 | -23.6 | NP_954922 | 5' arm 3' arm | ||
| 23768 | - | 59761 | 90 | 19.5 | -21.6 | 5' arm 3' arm | |||
| 23767 | - | 58159 | 90 | 19.5 | -29 | NP_954920 | 5' arm 3' arm | ||
| 23766 | - | 58016 | 90 | 20 | -21.6 | NP_954920 | 5' arm 3' arm | ||
| 23765 | - | 57726 | 89 | 22.5 | -19.8 | NP_954920 | 5' arm 3' arm | ||
| 23764 | - | 57306 | 90 | 21 | -24.6 | NP_954920 | 5' arm 3' arm | ||
| 23763 | - | 57153 | 90 | 20.5 | -28.8 | NP_954920 | 5' arm 3' arm | ||
| 23762 | - | 56240 | 89 | 21.5 | -21.1 | NP_954919 | 5' arm 3' arm | ||
| 23761 | - | 55713 | 87 | 23.5 | -26.3 | NP_954919 | 5' arm 3' arm | ||
| 23760 | - | 54530 | 87 | 19.5 | -25.8 | NP_954919 | 5' arm 3' arm | ||
| 23759 | - | 53497 | 90 | 20 | -19.8 | NP_954918 | 5' arm 3' arm | ||
| 23758 | - | 52030 | 89 | 19 | -23.1 | NP_954918 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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