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| GenBank Identifier | RefSeq Acc. | Name |
| 10834856 | NC_002577.1 | Gallid herpesvirus 3 |
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| ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF
|
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 9653 | + | 130289 | 86 | 25 | -28.9 | NP_066900 | 5' arm 3' arm | ||
| 9688 | - | 3157 | 89 | 27.5 | -27.5 | NP_066900 | 5' arm 3' arm | ||
| 9692 | - | 4168 | 90 | 22.5 | -28.3 | NP_066899 | 5' arm 3' arm | ||
| 9650 | + | 129415 | 90 | 22.5 | -28.3 | NP_066899 | 5' arm 3' arm | ||
| 9693 | - | 4317 | 87 | 24.5 | -20.5 | NP_066899 | 5' arm 3' arm | ||
| 9649 | + | 129266 | 87 | 24.5 | -20.5 | NP_066899 | 5' arm 3' arm | ||
| 9697 | - | 5038 | 89 | 23 | -32.1 | NP_066898 | 5' arm 3' arm | ||
| 9643 | + | 126865 | 90 | 33.5 | -32.7 | NP_066897 | 5' arm 3' arm | ||
| 9593 | + | 6629 | 90 | 24 | -22.5 | NP_066897 | 5' arm 3' arm | ||
| 9750 | - | 125174 | 90 | 26 | -24.1 | NP_066896 | 5' arm 3' arm | ||
| 9594 | + | 8409 | 90 | 26 | -24.1 | NP_066896 | 5' arm 3' arm | ||
| 9747 | - | 123814 | 90 | 27 | -26.4 | NP_066894 | 5' arm 3' arm | ||
| 9637 | + | 122892 | 88 | 20.5 | -25.9 | NP_066893 | 5' arm 3' arm | ||
| 9746 | - | 123401 | 87 | 20 | -23.4 | NP_066893 | 5' arm 3' arm | ||
| 9638 | + | 123174 | 89 | 24 | -24 | NP_066893 | 5' arm 3' arm | ||
| 9705 | - | 10691 | 88 | 20.5 | -25.9 | NP_066893 | 5' arm 3' arm | ||
| 9704 | - | 10409 | 89 | 24 | -24 | NP_066893 | 5' arm 3' arm | ||
| 9745 | - | 122979 | 88 | 23 | -29.7 | NP_066893 | 5' arm 3' arm | ||
| 9633 | + | 120127 | 89 | 22 | -21.8 | NP_066890 | 5' arm 3' arm | ||
| 9632 | + | 118396 | 89 | 26 | -20.2 | NP_066890 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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