miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13010	+	3472	89	19	-22.2	NP_570316		5' arm      3' arm
13040	+	33420	87	19.5	-22.1	NP_570361		5' arm      3' arm
13017	+	7372	89	22.5	-22.1			5' arm      3' arm
13066	-	21202	89	21.5	-22.1	NP_570341		5' arm      3' arm
13043	+	37912	86	21	-22.1	NP_570367		5' arm      3' arm
13042	+	37793	89	20	-22	NP_570367		5' arm      3' arm
13059	-	8322	89	20	-21.92	NP_570321		5' arm      3' arm
13030	+	22559	88	21	-21.9	NP_570343		5' arm      3' arm
13009	+	2483	84	19	-21.9			5' arm      3' arm
13012	+	3827	83	19.5	-21.8	NP_570316		5' arm      3' arm
13063	-	12475	90	21	-21.8	NP_570328		5' arm      3' arm
13026	+	15782	89	22	-21.6			5' arm      3' arm
13050	-	346	89	19	-21.6			5' arm      3' arm
13069	-	26895	90	20.5	-21.51	NP_570348		5' arm      3' arm
13065	-	20259	90	21	-21.5	NP_570339		5' arm      3' arm
13038	+	29533	90	21	-21.5	NP_570352		5' arm      3' arm
13081	-	44089	87	22	-21.4	NP_570384		5' arm      3' arm
13032	+	25882	81	20	-21.3	NP_570347		5' arm      3' arm
13071	-	28517	89	23	-21.3	NP_570351		5' arm      3' arm
13064	-	14132	89	20	-21.1	NP_570330		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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