miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
19443	-	22293	89	19.5	-20.2	NP_817894		5' arm      3' arm
19444	-	22569	90	20	-20.2	NP_817894		5' arm      3' arm
19296	+	14981	90	23	-20.2	NP_817883		5' arm      3' arm
19357	+	53519	89	22.5	-20.2	NP_817938		5' arm      3' arm
19374	+	60580	89	20.5	-20.2			5' arm      3' arm
19433	-	19021	90	19.5	-20.2	NP_817889		5' arm      3' arm
19482	-	38770	90	22.5	-20.2	NP_817912		5' arm      3' arm
19380	+	62392	89	21.5	-20.3	NP_817953		5' arm      3' arm
19278	+	4310	89	22	-20.3	NP_817863		5' arm      3' arm
19446	-	23396	89	21	-20.3	NP_817897		5' arm      3' arm
19493	-	42170	89	19.5	-20.4	NP_817916		5' arm      3' arm
19473	-	35360	88	19	-20.4	NP_817910		5' arm      3' arm
19312	+	25282	90	20	-20.4	NP_817901		5' arm      3' arm
19547	-	66504	88	19	-20.4	NP_817968		5' arm      3' arm
19330	+	38527	90	21.5	-20.4	NP_817912		5' arm      3' arm
19406	-	6757	90	22.5	-20.4	NP_817868		5' arm      3' arm
19455	-	26640	90	19	-20.5	NP_817905		5' arm      3' arm
19263	+	76	87	19	-20.5			5' arm      3' arm
19281	+	5632	85	19.5	-20.5	NP_817866		5' arm      3' arm
19479	-	37700	87	19	-20.6	NP_817912		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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