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| GenBank Identifier | RefSeq Acc. | Name |
| 29566284 | NC_004685.1 | Mycobacteriophage Corndog virion |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 19513 | - | 51732 | 84 | 21.5 | -19.4 | NP_817935 | 5' arm 3' arm | ||
| 19426 | - | 14764 | 87 | 20 | -19.4 | NP_817883 | 5' arm 3' arm | ||
| 19415 | - | 10305 | 88 | 19 | -19.4 | NP_817873 | 5' arm 3' arm | ||
| 19420 | - | 12792 | 90 | 22 | -19.5 | NP_817880 | 5' arm 3' arm | ||
| 19307 | + | 22225 | 87 | 20.5 | -19.5 | NP_817894 | 5' arm 3' arm | ||
| 19300 | + | 18412 | 88 | 19 | -19.5 | NP_817888 | 5' arm 3' arm | ||
| 19401 | - | 5531 | 89 | 19.5 | -19.6 | NP_817866 | 5' arm 3' arm | ||
| 19324 | + | 32435 | 90 | 19 | -19.7 | NP_817908 | 5' arm 3' arm | ||
| 19501 | - | 44932 | 87 | 21 | -19.7 | NP_817921 | 5' arm 3' arm | ||
| 19412 | - | 9237 | 90 | 21 | -19.7 | NP_817873 | 5' arm 3' arm | ||
| 19264 | + | 220 | 87 | 19.5 | -19.7 | NP_817852 | 5' arm 3' arm | ||
| 19316 | + | 26385 | 87 | 19 | -19.8 | NP_817905 | 5' arm 3' arm | ||
| 19475 | - | 36500 | 87 | 20.5 | -19.8 | NP_817911 | 5' arm 3' arm | ||
| 19448 | - | 24441 | 89 | 22 | -19.9 | NP_817900 | 5' arm 3' arm | ||
| 19424 | - | 14075 | 89 | 20 | -19.9 | NP_817883 | 5' arm 3' arm | ||
| 19370 | + | 59381 | 90 | 21 | -20 | NP_817947 | 5' arm 3' arm | ||
| 19430 | - | 16344 | 90 | 20 | -20.1 | NP_817885 | 5' arm 3' arm | ||
| 19553 | - | 69570 | 90 | 21.5 | -20.1 | NP_817973 | 5' arm 3' arm | ||
| 19498 | - | 43440 | 89 | 19.5 | -20.1 | NP_817920 | 5' arm 3' arm | ||
| 19481 | - | 38621 | 89 | 19 | -20.1 | NP_817912 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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