miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
19306	+	21796	80	19.5	-37.4	NP_817893		5' arm      3' arm
19452	-	25224	85	19	-36.5			5' arm      3' arm
19545	-	65465	88	23	-35.6	NP_817962		5' arm      3' arm
19442	-	21967	90	26	-35.1	NP_817893		5' arm      3' arm
19322	+	30956	86	23.5	-35	NP_817908		5' arm      3' arm
19352	+	51043	90	19.5	-34.8			5' arm      3' arm
19542	-	63779	90	28.5	-34	NP_817957		5' arm      3' arm
19331	+	38766	85	22.5	-33.5	NP_817912		5' arm      3' arm
19389	+	67147	90	20	-33	NP_817970		5' arm      3' arm
19360	+	54267	87	19	-32.8			5' arm      3' arm
19517	-	54352	88	19	-32.6			5' arm      3' arm
19348	+	48308	89	22	-32.4	NP_817929		5' arm      3' arm
19383	+	64355	90	19.5	-32.1	NP_817959		5' arm      3' arm
19453	-	26387	89	24.5	-32	NP_817905		5' arm      3' arm
19505	-	47468	87	19	-31.8	NP_817926		5' arm      3' arm
19384	+	65283	90	19	-31.5	NP_817962		5' arm      3' arm
19295	+	14457	84	23	-31.1	NP_817883		5' arm      3' arm
19408	-	7155	89	21.5	-31	NP_817869		5' arm      3' arm
19549	-	67104	89	20.5	-30.9	NP_817969		5' arm      3' arm
19440	-	20977	88	21	-30.8	NP_817892		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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