miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
6212	+	68817	89	21.5	-25.8	NP_045255		5' arm      3' arm
6208	+	58618	89	21.5	-21.3	NP_045248		5' arm      3' arm
6216	+	77688	89	21.5	-25	NP_045260		5' arm      3' arm
6293	-	120133	88	21.5	-24.3	NP_045282		5' arm      3' arm
6220	+	78804	89	21.5	-26.9	NP_045260		5' arm      3' arm
6221	+	79361	89	21.5	-20.2	NP_045260		5' arm      3' arm
6247	+	137917	88	21.5	-24.3	NP_045295		5' arm      3' arm
6244	+	135001	89	21.5	-22.5	NP_045293		5' arm      3' arm
6235	+	116595	89	21.5	-23.7	NP_045281		5' arm      3' arm
6230	+	115520	90	21.5	-22	NP_045281		5' arm      3' arm
6273	-	45171	90	21.5	-19.9	NP_045241		5' arm      3' arm
6262	-	14461	89	21.5	-23.8	NP_045229
6314	-	142530	90	21.5	-22	NP_045296		5' arm      3' arm
6309	-	141455	89	21.5	-23.7	NP_045281		5' arm      3' arm
6217	+	77887	90	21.5	-26.3	NP_045260		5' arm      3' arm
6201	+	17008	89	22	-27.93	NP_045230		5' arm      3' arm
6279	-	80084	79	22	-19.4	NP_045260		5' arm      3' arm
6287	-	110851	90	22	-31.2	NP_045280		5' arm      3' arm
6249	+	140765	89	22	-25	NP_045281		5' arm      3' arm
6270	-	38142	90	22	-24	NP_045241		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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